Source Biome

Your microbiome data, in one place.

Upload the microbiome tests you already have. Track them over time. Log your life alongside the data. And get a regular briefing on new microbiome research, curated and written for you.

Free · Non-profit · Not a medical service

SUBJECT · 0427412d15 SAMPLES · 204 TAXA
Why this exists

You paid to understand yourself. You got a PDF.

01

You paid $200. It expires in thirty days.

Most vendor reports are a one-time PDF. Open it, read it, lose access. The data you paid for vanishes from the dashboard before you’ve had time to think about it.

expires30 days
02

Your tests don’t talk to each other.

Last year’s test from one company can’t be compared to this year’s test from another. Different formats, different taxonomies, different measurements. You’re stuck with disconnected snapshots.

source αsource β
03

Google a bacteria, get a supplement ad.

When you search for a bacteria in your results, what comes back is either a wellness blog overpromising what one capsule can do, or a paywalled academic abstract you’d need a PhD to parse. Neither helps.

Akkermansia muciniphilaADBuy ProBiome+ADTop 5 supplements...ADRestore your gut nowADSubscribe for $49/mo

Atlas is the tool your microbiome test should have come with.

Introducing

Atlas

A longitudinal journal for your microbiome.

Atlas is the first product of The Source Biome Project, a non-profit effort to build open infrastructure for microbiome science.

It takes the microbiome tests you already have, makes them comparable across years and sources, lets you log your life alongside the data, and translates the research about your specific bacteria into plain language. On a regular cadence it also sends you a curated briefing on new microbiome research. No score. No recommendations. No ads. Just your biology, organized so it actually means something.

Atlas at a glance
  • ·Open now, free
  • ·Curated research reports, in plain language
  • ·Export or delete anytime
  • ·No scores, no recommendations
  • ·Non-profit, open-source
Capability 01

All your tests, finally connected.

Upload results from any supported testing company. Atlas normalizes them to a shared reference and tracks them over time, so a test from one source last year and a test from another source this year can sit on the same chart, with the same units.

Subject 0427 — sixteen months
5 tests · 3 sources · 1 timeline
src αMar 202416Ssrc βJul 2024shotgunsrc γNov 2024shotgunsrc βMar 2025shotgunsrc αJul 202516SBifidobacteriumAkkermansiaPrevotellaLactobacillus
Different sources. Different methods. One easy-to-understand trajectory.
Capability 02

Your life and your gut, on the same timeline.

Log what you eat, how you sleep, what medications you take, where you travel. Atlas lines them up against your test results, so you can see what changed when. We show you the data; you draw your own conclusions.

See how your life affects your gut
twelve months · journal & microbiome side-by-side
JournalHigh fiberTravelAbxRecoveryFermentedStressSleepPlant varietyMicrobiomeJanMarMayJulSepNov
Capability 03

Every bacteria in your results, becomes knowable.

A name in your report doesn’t have to stay a name. Atlas turns it into a full context: plain-language description, curated peer-reviewed research, how it behaves in your own data, which life events line up with its changes.

Every bacteria in your results becomes knowable
Everard et al.2013 · mouseChelakkot2018 · humanDao2016 · cohortDepommier2019 · trialPlovier2017 · mouseZhou2021 · reviewLee2022 · humanAkkermansiamuciniphila· well-replicated ·A mucin-degrading bacterium linked to ahealthier intestinal mucus layer.Lives in the intestinal liningthis taxon · in your datafibertravelfermented
From a name to a full context, in seconds.
Capability 04

Understand your results without becoming a researcher.

When you search for a bacteria in your report, you get one of two extremes: oversimplified wellness blogs that overpromise, or dense academic abstracts you’d need a PhD to parse. Atlas does the translation. Every bacteria gets a plain-language summary tied to the actual peer-reviewed research, with evidence tags telling you how confident to be, and links back to the source papers when you want to go deep.

The original paperWhat Atlas shows youNature Microbiology · 2023 · 8:1234–1248Akkermansia muciniphila modulatesintestinal barrier function via mucinglycan metabolism and host TLR2signaling: a multi-cohort analysisJ. Smith, L. Wang, P. Garcia, K. Anderson, et al.DEPT. OF MICROBIOLOGY · UNIV. OF EDINBURGH · UKAbstractFinding · highlightedMethodsReferences↑ 18 pages of jargontranslatedby atlasatlas summary · taxonAkkermansia muciniphilaphylum · verrucomicrobia· well-replicated ·in plain languageHelps maintain the mucus layer that lines yourintestine. Lower abundance is associated with athinner barrier in multiple human studies.what’s not settledMost evidence is correlational. Causal effects onhuman disease outcomes not yet confirmed.traceable · 7 linked studiesSmith 2023humanWang 2021cohortGarcia 2019trialLee 2022review↑ same finding · 1 paragraph · 30 seconds
Capability 05

Your data is yours.

Atlas stores your tests and journal entries encrypted at rest and in transit. Export everything in CSV or JSON whenever you want. Delete your account permanently. Contributing to the research commons is a separate choice you can revoke any time. We never sell individual-level data. Full stop.

What we promise
$0
Individual-level data sold, ever — to anyone, for any reason.
1 click
to export everything as CSV or JSON
2 clicks
to delete your account and all data, permanently
Encrypted
At rest and in transit. Your data is never shared with advertisers, never used to train models we don’t tell you about, never sold under any circumstance.
Your data · settings
Account: subject 0427
5 microbiome tests
3 vendors · 16 months
127 journal entries
Diet · symptoms · meds · sleep
12 read research summaries
Akkermansia, Bifidobacterium, others
Contribute to research commons
Anonymous. Revocable any time.
Show me on contributor wall
By first name only. Optional.
Permanent. Confirmation required.
Capability 06

Stay current on the research, without the homework.

Microbiome science moves fast, and most of it is locked in dense journal articles. So Atlas does the reading for you. On a regular schedule, it gathers the latest research and turns it into a clear, plain-language report: structured, sourced, and honest about what's still uncertain. Every account gets them, past reports stay in your library, and you never have to go hunting for what's new.

Source Biome · Atlas report
Monthly · Gut

The gut, in motion: what recent research is saying

Executive summary

Three threads dominated the last cycle of gut-microbiome research. Mucus specialists such as Akkermansia muciniphila drew renewed metabolic interest, though the strongest claims remain associational, not causal.

Exhibit 1 · Abundance vs. method

Shotgun sequencing reported A. muciniphila at 1.8–4.2% (median 2.6%); 16S surveys reported 0.4–1.9%. Treat cross-method differences as method artifacts, not biology.

Sourced & citedHonest about uncertaintyNo hype
The bigger picture

Atlas is the first piece of something bigger.

The Source Biome Project is a non-profit effort building open infrastructure for microbiome science: a tool, a public research commons, at-home test kits, and open-source lab hardware. Each piece is built in public, governed transparently, and feeds the next.

Phase 01
· in progress

Atlas

Open now

A longitudinal journal for your microbiome data, plus a curated briefing on new research. The product you came here for — free to use.

Phase 02
· in progress

A free, public research commons

Live now, growing

An anonymized dataset that grows with every member (on by default, and you control what you share). More contributors means sharper context in your own account and faster science for the field.

kit · 01
Phase 03

Inexpensive test kits

End of 2026

Affordable at-home test kits processed by a partner CLIA lab. Results flow straight into your Atlas account.

Phase 04

Community labs, open hardware

2027 and beyond

Open-source desktop sample-processing hardware so community labs, classrooms, and citizen-science groups can drive the cost of microbiome testing down.

The Source Biome Project is a 501(c)(3) community-funded nonprofit organization. Not venture-backed. Not building toward an acquisition. The code, protocols, and hardware designs will all be public.
non-profit · open-source · governed by contributors
Get started

Atlas is open. Create your account.

Start your journal.

Free, and free to leave — export or delete your data anytime. Upload the tests you already have, keep a journal alongside them, and read the research as it moves. No scores, no recommendations, no ads.

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